Transforming XML file: NeuroMLFiles/Examples/ChannelML/CaHVA_Chan.xml using XSL file: NeuroMLFiles/Schemata/v1.8.1/Level2/ChannelML_v1.8.1_Updated.xsl
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Converting the file: CaHVA_Chan.xml<?xml version="1.0" encoding="UTF-8"?>NOTE: The following is only useful when the file to be converted is a ChannelML file with a pre v1.7.3 structure to the current_voltage_relation element!! The text below will have to be manually tuned to create a valid ChannelML file in the new format <channelml xmlns="http://morphml.org/channelml/schema" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:meta="http://morphml.org/metadata/schema" xsi:schemaLocation="http://morphml.org/channelml/schema http://www.neuroml.org/NeuroMLValidator/NeuroMLFiles/Schemata/v1.8.1/Level2/ChannelML_v1.8.1.xsd" units="SI Units"> <meta:notes>A channel from Maex, R and De Schutter, E. Synchronization of Golgi and Granule Cell Firing in a Detailed Network Model of the Cerebellar Granule Cell Layer</meta:notes> <channel_type name="Gran_CaHVA_98"> <status value="stable"> <meta:comment>Verified equivalence of NEURON and GENESIS mapping to orig GENESIS impl from www.tnb.ua.ac.be.</meta:comment> <meta:comment>Updated to post v1.7.3 new ChannelML format</meta:comment> <meta:contributor> <meta:name>Padraig Gleeson</meta:name> </meta:contributor> </status> <meta:notes>A High Voltage Activated Ca2+ channel</meta:notes> <meta:authorList> <meta:modelAuthor> <meta:name>Maex, R.</meta:name> </meta:modelAuthor> <meta:modelAuthor> <meta:name>De Schutter, E.</meta:name> </meta:modelAuthor> <meta:modelTranslator> <meta:name>Padraig Gleeson</meta:name> <meta:institution>UCL</meta:institution> <meta:email>p.gleeson - at - ucl.ac.uk</meta:email> </meta:modelTranslator> </meta:authorList> <meta:publication> <meta:fullTitle>Maex, R and De Schutter, E. Synchronization of Golgi and Granule Cell Firing in a Detailed Network Model of the cerebellar Granule Cell Layer. J Neurophysiol, Nov 1998; 80: 2521 - 2537</meta:fullTitle> <meta:pubmedRef>http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=9819260&dopt=Abstract</meta:pubmedRef> </meta:publication> <meta:neuronDBref> <meta:modelName>Calcium channels</meta:modelName> <meta:uri>http://senselab.med.yale.edu/senselab/NeuronDB/channelGene2.htm#table1</meta:uri> </meta:neuronDBref> <!-- NOTE: Some manual "tuning" of this code is needed to make a valid post v1.7.3 file! Including: - Removal of xmlns=... - Check through the generic functions, as plus signs can disappear from expressions - Also in expressions with conditions, the greater-than sign should be replaced with - -ampersand- -gt; --><current_voltage_relation xmlns="" cond_law="ohmic" ion="" default_gmax="" default_erev=""/> </channel_type> </channelml> |
Time to transform file: 0.029 secs