Transforming XML file: NeuroMLFiles/Examples/ChannelML/CellWithChannels.xml
using XSL file:
NeuroMLFiles/Schemata/v1.8.1/Level3/NeuroML_Level3_v1.8.1_HTML.xsl
View original file before transform
|
Converting the file: CellWithChannels.xml
NeuroML Level 3 file
| General notes | This example shows a Level 2 compliant file, containing morphology and
channel information. Note that the specification of the channel mechanism
would normally be in separate files. |
Cell: CellWithChannels
| Name | CellWithChannels |
| Description |
| As described in the NeuroML file |
| Test cell for showing how channels can be placed on a cell |
| Total number of segments | 6 |
| Total number of cables | 3
with 1 soma cable(s),
2 dendritic cable(s)
and 0 axonal cable(s)
|
| Cable details |
SomaSec (id:0),
number of segments in cable: 1
This cable is present in groups: all soma_group
DendSec1 (id:1), fraction along parent cable: 0.5,
number of segments in cable: 3
This cable is present in groups: all dendrite_group
DendSec2 (id:2),
number of segments in cable: 2
This cable is present in groups: all dendrite_group
|
Biophysical properties of cell: CellWithChannels
| Unit system of biophysical entities |
| This can be either SI Units or Physiological Units |
| Physiological Units |
| Channel Mechanism: pas |
| An active membrane conductance |
|
Conductance density (gmax) of 0.0330033 mS cm-2 on: all
|
| Specific Capacitance |
| This is the capacitance per unit area of the membrane |
| Specific Capacitance of
1.0 uf/cm2 on: all some
|
| Specific Axial Resistance |
| This is the specific cytoplasmic resistance along a dendrite/axon |
| Specific Axial Resistance of
0.1 Kohm cm on: all
|
| Initial Membrane Potential |
| This quantity is often required for computational simulations and specifies the potential
difference across the membrane at the start of the simulation. |
| Initial Membrane Potential
-70 mV on: all
|
Channel: pas
| Name | pas |
| Description |
| As described in the ChannelML file |
| Simple example of a leak/passive conductance. |
|
Time to transform file: 0.144 secs
